Adventures & experiences in contemporary technology
Though I use only the command line to do system updates, I still got system restart messages every time a new kernel version was installed. While they can be helpful, I actually prefer to be left to my own devices when it comes to restarting a system and I may have a something running at the time that I do not wish to interrupt.
In Ubuntu GNOME 13.10 and before, there was no sign of these messages so I decided to see if I could go nag free again. The responsible application is called Update Notifier and I tried seeing if I could remove it but that act has a major impact of the system so it was not a useful way to go.
As it happens, it is an application that starts up automatically at computer boot time but there was no sign of an entry for it in the Startup Applications Preferences screen (started using from the command line using gnome-session-properties). The for this is that there is flag called NoDisplay in the relevant autostart shortcut in /etc/xdg/autostart/ that stops it appearing in the aforementioned settings screen when set to true. The trick then is to set it to false and the following command (broken over two lines for sake of display and quotes could need replacing when you issue the command too) does the trick for all such hidden start-up applications:
sudo sed -i ‘s/NoDisplay=true/NoDisplay=false/g’
/etc/xdg/autostart/*.desktop
What the above does is that sed goes into every file and changes NoDisplay=true to NoDisplay=false in each file with the desktop extension. When that has completed, there are more entries in Startup Applications Preferences and Update Notifier can be deselected in order to stop it starting. Removing the relevant .desktop file would be a more permanent change but this one will do me, especially since no more of those pesky restart messages appear anymore. My regularity when it came to system updates meant that the update messages never appeared anyway and I tend to shut down my system at the end of every day so the updates will be picked up too so all should be well.
When I recently did my usual system update for the stable version Ubuntu GNOME, there were some updates pertaining to apt and the process failed when I executed the following command:
sudo apt-get upgrade
Usefully, some messages were issued and here’s a flavour:
Setting up apt (0.9.9.1~ubuntu3.1) …
ERROR: Can’t find the archive-keyring
Is the ubuntu-keyring package installed?
dpkg: error processing apt (--configure):
subprocess installed post-installation script returned error exit status 1
Errors were encountered while processing:
apt
E: Sub-process /usr/bin/dpkg returned an error code (1)
Some searching on the web revealed that the problem was that there were no files in /usr/share/keyring when there should have been and I had not removed them myself so I have no idea how they disappeared. Various remedies were tried and any that needed software installed were non-starters because apt was disabled by the lack of keyring files. The workaround that restored things for me was to take a copy of the files in /usr/share/keyring from an Ubuntu GNOME 14.04 installation in a VirtualBox VM and copy them in to the same location in its Ubuntu GNOME 13.10 host. For those without such resources, I have packaged them in a zip file below. Other remedies like Y PPA also were suggested where I was reading but that software package needed installing beforehand so it was little use to me when the likes of Synaptic were disabled. If there are other remedies that do not involve an operating system re-installation, I would like to know about them too as well as possible causes for the file loss in the first place and how to avoid these.
With my tendency to apply Linux updates using the command, I was happy to see that something similar was possible in FreeBSD too. The first step is to fire up a terminal session and drop into root using the su command. That needs the root superuser password in order to continue and the next step is to update the local repositories using the following command:
pkg update
After that, it is time download updated packages and install these by issuing this command:
pkg upgrade
Most of the time, that is sufficient but I discovered that there are times when the above fails and additional interventions are needed. What I had uncovered were dependency error messages and I set to looking around the web for remedies to this. One forum question that was similar to what I had met with the suggestion of consulting the file called UPDATING in /usr/ports/. An answer like that looks unhelpful but for the inclusion of advice where extra actions were needed. Also, there is a useful article on updating FreeBSD ports that gives more in the way of background knowledge so you understand the more about what needs doing.
Following both that and the UPDATING file resulted in my taking the following sequence of steps. The first act was to download and initialise the Ports Collection, a set of build instructions.
portsnap fetch extract
The above is a one time only action so future updates are done as follows:
portsnap fetch update
With an up to date Ports Collection in place, it was time to install portman:
pkg install portman
A look through /usr/ports/UPDTAING revealed the commands I needed for updating Python and Perl to address the dependency problem that I was having:
portmaster -o devel/py-setuptools27 devel/py-setuptools
portmaster -r py\*setuptools
With those completed, I re-ran pkg update again and all was well. The extra actions needed to get that result will not get forgotten and I am sharing them on here so I know where they are. If anyone else has use for them, that would be even better.
With its final release being near at hand, I decided to have a look at the beta release of Ubuntu GNOME 13.10 to get a sense of what might be coming. A misstep along the way had me inadvertently download and install the 64-bit edition of 13.04 into a VirtualBox virtual machine. The intention to update that to its soon to be released successor was scuppered by instability so I never did get to try out an in situ upgrade to 13.10. What I had in mind was to issue the following command:
gksu update-manager -d
However, I found another one when considering how Ubuntu Server might be upgraded without the GUI application that is the Update Manager. To update to a development version, the following command is what you need:
sudo do-release-upgrade -d
To upgrade to a final release of of a new version of Ubuntu, drop the -d switch from the above to use the following:
sudo do-release-upgrade
There is one further option that isn’t recommended for moving between Ubuntu versions but I use it to get updates such as new kernel subversions that are released:
sudo apt-get dist-upgrade
Rather than trying out the above, I downloaded the latest ISO image for the beta release of Ubuntu GNOME 13.10 and installed onto a VM that instead. Though it is the 32 bit version of the distro that is installed on my main home PC, it has been the 64 bit version that I have been trying. So far, that seems to be behaving itself even if it feels a little sluggish but that could be down to the four year old PC that hosts the virtual machine. For a while, I have been playing with the possibility of an upgrade involving an Intel Core i5 4670K CPU and 16 GB of RAM (useful for running multiple virtual machines at a time) along with any motherboard that supports those so looking at a 64 bit operating system has its uses.
The Linux kernel may be 3.11 but that is not my biggest concern. Neither is the fact that LibreOffice 4.1.2.3 was included and GIMP wasn’t, especially when that could be added easily anyway and it is version 2.8.6 that you get. The move to GNOME Shell 3.8 was what drew me to seeing what was coming because I have been depending on a number extensions. As with WordPress and plugins, GNOME Shell seems to have a tempestuous relationship with some of its extensions and I wanted to see which ones still worked. There also has been a change to the backstage application view in that you either get all installed applications displayed when you browse them or you have to start typing the name of the one you want to select it. Losing the categorical view that has been there until GNOME Shell 3.6 is a step backwards and I hope that version 3.10 has seen some sort of a reinstatement. There is a way to add these categories and the result is not as it once was either; also, it shouldn’t be necessary for anyone to dive into a systems innards to address things like this. With all the constant change, it is little wonder that Cinnamon has become a standalone entity with the release of its version 2.0 and that Debian’s toyed with not going with GNOME for its latest version (7.1 at the time of writing and it picked a good GNOME Shell version in 3.4).
Having had a look at other distribution that already have GNOME Shell 3.8, I knew that a few of my extensions worked with it. The list includes Frippery Bottom Panel, Frippery Move Clock, Places Status Indicator, Removable Drive Menu, Remove Rounded Corners (not really needed with the GNOME Shell theme that I use, Elementary Luna 3.4, but I retain it anyway), Show Desktop Button, User Themes and Ignore_Request_Hide_Titlebar. Because of the changes to the backstage view, I added Frippery Applications Menu in preference to Applications Menu because I have found that to be unstable. Useful new discoveries have included Curtains Up and GNOME Shell Open Terminal while Shell Restart User Menu Entry has made a return and found a use this time around too.
There have been some extensions that were not updated to work with GNOME Shell 3.8 that I have got working. In some cases, it was as simple as updating the metadata.json file for an extension with new version numbers of 3.8 and 3.84 to the list associated with the shell version property. All extensions are to be found in the .local/share/gnome-shell/extensions location in your home directory and each has a dedicated file containing the aforementioned file.
With others, it was a matter of looking in the Looking Glass (execute lg in the box that ALT + F2 brings up on your screen to access this) and seeing what error messages were to be found in there before attempting to correct these in either the extensions’ extension.js files or whatever JavaScript (*.js) file was causing the problem. With either or both of these remedies, I managed to port the four extensions below to GNOME Shell 3.8. In fact, you can download these zip files and install them yourself to see how you get on with them.
Advanced Settings in User Menu
There is a Remove Panel App Menu that works with GNOME Shell 3.8 but I found that it got rid of the Places menu instead of the panel’s App Menu so I tried porting the older extension to see if it behaved itself and it does. With these in place, I have bent Ubuntu GNOME 13.10 to my will ahead of its final release next week and that includes customising Nautilus too. Other than a new version of GNOME Shell, it looks as if it will come with less in the way of drama and a breather like that is no bad thing given that personal computing continues to remain in a state of flux these days.
Ever since the Songbird project concentrated its efforts to support only Windows and OS X, the Firefox-based music player has been absent from a Linux user’s world. However, the project is open source and a fork called Nightingale now fulfils the same needs. Intriguingly, it too is available for Windows for OS X users so I am left wondering why that overlap has happened. However, Songbird also is available as a web app and as an app on both Android and iOS while Nightingale sticks to being a desktop application.
To add it to Ubuntu, you need to set up a new repository. That can be done using the Software Centre but issuing a command in a terminal can be so much quicker and cleaner so here it is:
sudo add-apt-repository ppa:nightingaleteam/nightingale-release
Apart from entering your password, there will be prompt to continue by pressing the carriage return key or cancelling with CTRL + C. For our purposes, it is the first action that’s needed and once that’s done the needful, you can execute the following command:
sudo apt-get update && sudo apt-get install nightingale
This is in two parts: the first updates the repositories on your system and second actually installs the software. When that is complete, you are ready run Nightingale and, with the repository, staying up to date is not chore either. In fact, using the above commands brings another advantage and it is that they should in any Ubuntu derivatives such as Linux Mint.
Not being a gaming enthusiast, having to upgrade graphics cards in PC’s is not something that I do very often or even rate as a priority. However, two PC’s in my possession have had that very piece of hardware upgraded on them and it’s not because anything was broken either. My backup machine has seen quite a few Linux distros on there since I built it nearly four years ago. The motherboard is an ASRock K10N78 that sourced from MicroDirect and it has onboard an NVIDIA graphics chip that has performed well if not spectacularly. One glitch that always existed was a less than optimal text rendering in web browsers but that never was enough to get me to add a graphics card to the machine.
More recently, I ran into trouble with Sabayon 13.04 with only the 2D variant of the Cinnamon desktop environment working on it and things getting totally non-functional when a full re-installation of the GNOME edition was attempted. Everything went fine until I added the latest updates to the system when a reboot revealed that it was impossible to boot into a desktop environment. Some will relish this as a challenge but I need to admit that I am not one of those. In fact, I tried out two Arch-based distros on the same PC and got the same results following a system update on each. So, my explorations of Antergos and Manjaro have to continue in virtual machines instead.
To get a working system, I gave Linux Mint 15 Cinnamon a go and that worked a treat. However, I couldn’t ignore that the cutting edge distros that I tried before it all took exception to the onboard NVIDIA graphics. systemd has been implemented in all of these and it seems reasonable to think that it is coming to Linux Mint at some stage in the future so I went about getting a graphics card to add into the machine. Having had good experiences with ATi’s Radeon in the past, I stuck with it even though it now is in the hands of AMD. Not being that fussed so long there was Linux driver support, I picked up a Radeon HD 6450 card from PC World. Adding it into the PC was a simpler of switching off the machine, slotting in the card, closing it up and powering it on again. Only later on did I set the BIOS to look for PCI Express graphics before anything else and I could have got away without doing that. Then, I made use of the Linux Mint Additional Driver applet in its setting panel to add in the proprietary driver before restarting the machine to see if there were any visual benefits. To sort out the web browser font rendering, I used the Fonts applet in the same settings panel and selected full RGBA hinting. The improvement was unmissable if not still like the appearance of fonts on my main machine. Overall, there had been an improvement and a spot of future proofing too.
That tinkering with the standby machine got me wondering about what I had on my main PC. As well as onboard Radeon graphics, it also gained a Radeon 4650 card for which 3D support wasn’t being made available by Ubuntu GNOME 12.10 or 13.04 to VMware Player and it wasn’t happy about this when a virtual machine was set to have 3D support. Adding the latest fglrx driver only ensured that I got a command line instead of a graphical interface. Issuing one of the following commands and rebooting was the only remedy:
sudo apt-get remove fglrx
sudo apt-get remove fglrx-updates
Looking at the AMD website revealed that they no longer support 2000, 3000 or 4000 series Radeon cards with their latest Catalyst driver the last version that did not install on my machine since it was built for version 3.4.x of the Linux kernel. A new graphics card then was in order if I wanted 3D graphics in VWware VM’s and both GNOME and Cinnamon appear to need this capability. Another ASUS card, a Radeon HD 6670, duly was acquired and installed in a manner similar to the Radeon HD 6450 on the standby PC. Apart from not needing to alter the font rendering (there is a Font tab on Gnome Tweak Tool where this can be set), the only real exception was to add the Jockey software to my main PC for installation of the proprietary Radeon driver. The following command does this:
sudo apt-get install jockey-kde
When that was done I issue the jockey-kde command and selected the first entry on the list. The machine worked as it should on restarting apart from an AMD message at the bottom right hand corner bemoaning unrecognised hardware. There had been two entries on that Jockey list with exactly the same name so it was time to select the second of these and see how it went. On restarting, the incompatibility message had gone and all was well. VMware even started virtual machines with 3D support without any messages so the upgrade did the needful there.
Hearing of someone doing two PC graphics card upgrades in a weekend may make you see them as an enthusiast but my disinterest in computer gaming belies this. Maybe it highlights that Linux operating systems need 3D more than might be expected. The Cinnamon desktop environment now issues messages if it is operating in 2D mode with software 3D rendering and GNOME always had the tendency to fall back to classic mode, as it had been doing when Sabayon was installed on my standby PC. However, there remain cases where Linux can rejuvenate older hardware and I installed Lubuntu onto a machine with 10 year old technology on there (an 1100 MHz Athlon CPU, 1GB of RAM and 60GB of hard drive space in case dating from 1998) and it works surprisingly well too.
It seems that having fancier desktop environments like GNOME Shell and Cinnamon means having the hardware on which it could run. For a while, I have been tempted by the possibility of a new PC since even my main machine is not far from four years old either. However, I also spied a CPU, motherboard and RAM bundle featuring an Intel Core i5-4670 CPU, 8GB of Corsair Vengence Pro Blue memory and a Gigabyte Z87-HD3 ATX motherboard included as part of a pre-built bundle (with a heatsink and fan for the CPU) for around £420. Even for someone who has used AMD CPU’s since 1998, that does look tempting but I’ll hold off before making any such upgrade decisions. Apart from exercising sensible spending restraint, waiting for Linux UEFI support to mature a little more may be no bad idea either.
Update 2013-06-23: The new graphics card in my main machine is working as it should and has reduced the number of system error report messages turning up too; maybe Ubuntu GNOME 13.04 didn’t fancy the old graphics card all that much. A rogue .fonts.conf file was found in my home area on the standby machine and removing it has improved how fonts are displayed on there immeasurably. If you find one on your system, it’s worth doing the same or renaming it to see if it helps. Otherwise, tinkering with the font rendering settings is another beneficial act and it even helps on Debian 6 too and that uses GNOME 2! Seeing what happens on Debian 7.1 could be something that I go testing sometime.
Linux Mint 14 may be out now but I’ll be sticking with its predecessor for now. Being a user of GNOME Shell instead of Cinnamon or Mate, I’ll wait for extensions to get updated for 3.6 before making a move away from 3.4 where the ones that I use happily work. Given that Linux Mint 13 is set to get support until 2017, it’s not as if there is any rush either. Adding the back-ported packages repository to my list of software sources means that I will not miss out on the latest versions of MDM, Cinnamon and Mate anyway. With Ubuntu set to stick to GNOME 3.6 until after 13.04 is released, adding the GNOME 3 Team PPA will be needed if 3.8 arrives with interesting goodies; there are interesting noises that suggest the approach taken in Linux Mint 12 may be used to give more of a GNOME 2 desktop experience. Options abound and there are developments in the pipeline that I hope to explore too.
However, there is one issue that I have had to fix which stymies upgrades within the 3.2 kernel branch. A configuration file (/etc/grub.d/10_linux) points to /usr/share/grub/grub-mkconfig_lib instead of /usr/lib/grub/grub-mkconfig_lib so I have been amending it every time I needed to do a kernel update. However, it just reverts to the previous state so I thought of another solution: creating a symbolic link in the incorrect location that points to the correct one so that updates complete without manual intervention every time. The command that does the needful is below:
sudo ln -s /usr/lib/grub/grub-mkconfig_lib /usr/share/grub/grub-mkconfig_lib
Of course, figuring out what causes the reversion would be good too but the symbolic link fix works so well that there’s little point in exploring it further. Of course, if anyone can add how you’d do that, I’d welcome this advice too. New knowledge always is good.
One way of doing this is to go to the Nvidia website and download the latest file from the relevant page on there. Then, the next stage is to restart your PC and choose rescue mode instead of the more usual graphical option. This drops you onto a command shell that is requesting your root password. Once this is done, you can move onto the next stage of the exercise. Migrate to the directory where the *.run file is located and issuing a command similar to the following:
bash NVIDIA-Linux-x86_64-295.40.run
The above was the latest file available at the time of writing so the name may have changed by the time that you read this. If the executable asks to modify your X configuration file, I believe that the best course is to let it do that. Editing it yourself or running nvidia-xconfig are alternative approaches if you so prefer.
Proprietary Nvidia drivers are included the repositories for Linux Mint Debian Edition so that may be a better course of action since you will get updates through normal system update channels. Then, the course of action is to start by issuing the following installation comands:
sudo apt-get install module-assistant
sudo apt-get install nvidia-kernel-common
sudo apt-get install nvidia-glx
sudo apt-get install kernel-source-NVIDIA
sudo apt-get install nvidia-xconfig
Once those have completed, issuing the following in turn will complete the job ahead of a reboot:
sudo m-a a-i nvidia
sudo modprobe nvidia
sudo nvidia-xconfig
If you reboot before running the above like I did, you will get a black screen with a flashing cursor instead of a full desktop because X failed to load. Then, the remedy is to reboot the machine and choose the rescue mode option, provide the root password and issue the three commands (at this point, the sudo prefix can be dropped because it’s unneeded) then. Another reboot will see order restored and the new driver in place. Running the following at that point will do a check on things as will be the general appearance of everything:
glxinfo | grep render
After an aborted installation in VirtualBox using the direct installation, I got a VM instance of Ubuntu 12.04 in place by installing from a loaded Live CD session. That proceeded without any trouble and downloaded the required updates too. First impressions revealed a polished Unity interface that ran without any crashes. Adding VirtualBox’s Guest Additions in the usual way was all that was needed to tart up the experience even more. However, there remains a wish list for improvements to unity so here are mine:
In summary, it does look as if the Unity interface is getting more and more polished. However, there are niggles that I have described above that I think need addressing and I hope that many of them will addressed in either 12.04 or 12.10. Usability seems to be improving but I still am left with the impression that it has a way to go yet.
Though it isn’t the recommended approach, I have ended up upgrading to Linux Mint 12 from Linux Mint 11 using an in situ route. Having attempted this before with a VirtualBox hosted installation, I am well aware of the possibility of things going wrong. Then, a full re-installation was needed to remedy the situation. With that in mind, I made a number of backups in the case of an emergency fresh installation of the latest release of Linux Mint. Apache and VirtualBox configuration files together with MySQL backups were put where they could be retrieved should that be required. The same applied to the list of installed packages on my system. So far, I haven’t needed to use these, but there is no point in taking too many chances.
The first step in an in-situ Linux Mint upgrade is to edit /etc/apt/sources.list. In the repository location definitions, any reference to katya (11) was changed to lisa (for 12) and the same applied to any appearance of natty (Ubuntu 11.04) which needed to become oneiric (Ubuntu 11.10). With that done, it was time to issue the following command (all one line even if it is broken here):
sudo apt-get update && sudo apt-get upgrade && sudo apt-get dist-upgrade
Once that had completed, it was time to add the new additions that come with Linux Mint 12 to my system using a combination of apt-get, aptitude and Synaptic; the process took a few cycles. GNOME already was in place from prior experimentation, so there was no need to add this anew. However, I need to instate MGSE to gain the default Linux Mint customisations of GNOME 3. Along with that, I decided to add MATE, the fork of GNOME 2. That necessitated the removal of two old libraries (libgcr0 and libgpp11, if I recall correctly but it will tell you what is causing any conflict) using Synaptic. With MGSE and MATE in place, it was time to install LightDM and its Unity greeter to get the Linux Mint login screen. Using GDM wasn’t giving a very smooth visual experience and Ubuntu, the basis of Linux Mint, uses LightDM anyway. Even using the GTK greeter with LightDM produced a clunky login box in front of a garish screen. Configuration tweaks could have improved on this but it seems that using LightDM and Unity greeter is what gives the intended setup and experience.
With all of this complete, the system seemed to be running fine until the occasional desktop freeze occurred with Banshee running. Blaming that, I changed to Rhythmbox instead, though that helped only marginally. While this might be blamed on how I upgraded my system, things seemed to have steadied themselves in the week since then. As a test, I had the music player going for a few hours and there was no problem. With the call for testing of an update to MATE a few days ago, it now looks as if there may have been bugs in the original release of Linux Mint 12. Daily updates have added new versions of MGSE and MATE so that may have something to do with the increase in stability. Even so, I haven’t discounted the possibility of needing to do a fresh installation of Linux Mint 12 just yet. However, if things continue as they are, then it won’t be needed and that’s an upheaval avoided should things go that way. That’s why in situ upgrades are attractive though rolling distros like Arch Linux (these words are being written on a system running this) and LMDE are more so.